MRI
Queensland Twin Adolescent Brain (QTAB)

This dataset has been published! You can make changes to this Draft page, then create a new version to make them public.

OpenNeuro Accession Number: ds004146Files: 27714Size: 745.14GB

BIDS Validation

3 Warnings Valid

We found 3 Warnings in your dataset. You are not required to fix warnings, but doing so will make your dataset more BIDS compliant.

view 3 warnings in 1430 files

Warning: 124 files

Not all subjects/sessions/runs have the same scanning parameters.

Location:

/sub-0006/ses-02/func/sub-0006_ses-02_task-emotionalconflict_bold.nii.gz

Reason:

The most common set of dimensions is: 90,90,60,837 (voxels), This file has the dimensions: 90,90,60,830 (voxels).

Location:

/sub-0024/ses-02/func/sub-0024_ses-02_task-emotionalconflict_bold.nii.gz

Reason:

The most common set of dimensions is: 90,90,60,837 (voxels), This file has the dimensions: 90,90,60,830 (voxels).

Location:

/sub-0073/ses-02/func/sub-0073_ses-02_task-emotionalconflict_bold.nii.gz

Reason:

The most common set of dimensions is: 90,90,60,837 (voxels), This file has the dimensions: 90,90,60,830 (voxels).

Location:

/sub-0093/ses-02/func/sub-0093_ses-02_task-emotionalconflict_bold.nii.gz

Reason:

The most common set of dimensions is: 90,90,60,837 (voxels), This file has the dimensions: 90,90,60,830 (voxels).

Location:

/sub-0109/ses-01/anat/sub-0109_ses-01_UNIT1.nii.gz

Reason:

The most common set of dimensions is: 192,300,320 (voxels), This file has the dimensions: 208,300,320 (voxels).

Location:

/sub-0109/ses-01/anat/sub-0109_ses-01_inv-1_MP2RAGE.nii.gz

Reason:

The most common set of dimensions is: 192,300,320 (voxels), This file has the dimensions: 208,300,320 (voxels).

Location:

/sub-0109/ses-01/anat/sub-0109_ses-01_inv-2_MP2RAGE.nii.gz

Reason:

The most common set of dimensions is: 192,300,320 (voxels), This file has the dimensions: 208,300,320 (voxels).

Location:

/sub-0113/ses-01/anat/sub-0113_ses-01_UNIT1.nii.gz

Reason:

The most common set of dimensions is: 192,300,320 (voxels), This file has the dimensions: 208,300,320 (voxels).

Location:

/sub-0113/ses-01/anat/sub-0113_ses-01_inv-1_MP2RAGE.nii.gz

Reason:

The most common set of dimensions is: 192,300,320 (voxels), This file has the dimensions: 208,300,320 (voxels).

Location:

/sub-0113/ses-01/anat/sub-0113_ses-01_inv-2_MP2RAGE.nii.gz

Reason:

The most common set of dimensions is: 192,300,320 (voxels), This file has the dimensions: 208,300,320 (voxels).

and 14 more files

Warning: 2703 files

It is recommended to define 'BackgroundSuppressionPulseTime' for this file, when the 'BackgroundSuppression' is set to true. 'BackGroundSuppressionPulseTime' is an array of numbers containing timing, in seconds, of the background suppression pulses with respect to the start of the labeling. In case of multi-PLD with different background suppression pulse times, only the pulse time of the first PLD should be defined.

Location:

/sub-0001/ses-01/perf/sub-0001_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0001/sub-0001_asl.json, /sub-0001/ses-01/sub-0001_ses-01_asl.json, /sub-0001/ses-01/perf/sub-0001_ses-01_asl.json

Location:

/sub-0001/ses-02/perf/sub-0001_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0001/sub-0001_asl.json, /sub-0001/ses-02/sub-0001_ses-02_asl.json, /sub-0001/ses-02/perf/sub-0001_ses-02_asl.json

Location:

/sub-0002/ses-01/perf/sub-0002_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0002/sub-0002_asl.json, /sub-0002/ses-01/sub-0002_ses-01_asl.json, /sub-0002/ses-01/perf/sub-0002_ses-01_asl.json

Location:

/sub-0003/ses-01/perf/sub-0003_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0003/sub-0003_asl.json, /sub-0003/ses-01/sub-0003_ses-01_asl.json, /sub-0003/ses-01/perf/sub-0003_ses-01_asl.json

Location:

/sub-0003/ses-02/perf/sub-0003_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0003/sub-0003_asl.json, /sub-0003/ses-02/sub-0003_ses-02_asl.json, /sub-0003/ses-02/perf/sub-0003_ses-02_asl.json

Location:

/sub-0004/ses-02/perf/sub-0004_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0004/sub-0004_asl.json, /sub-0004/ses-02/sub-0004_ses-02_asl.json, /sub-0004/ses-02/perf/sub-0004_ses-02_asl.json

Location:

/sub-0005/ses-01/perf/sub-0005_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0005/sub-0005_asl.json, /sub-0005/ses-01/sub-0005_ses-01_asl.json, /sub-0005/ses-01/perf/sub-0005_ses-01_asl.json

Location:

/sub-0005/ses-02/perf/sub-0005_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0005/sub-0005_asl.json, /sub-0005/ses-02/sub-0005_ses-02_asl.json, /sub-0005/ses-02/perf/sub-0005_ses-02_asl.json

Location:

/sub-0006/ses-02/perf/sub-0006_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0006/sub-0006_asl.json, /sub-0006/ses-02/sub-0006_ses-02_asl.json, /sub-0006/ses-02/perf/sub-0006_ses-02_asl.json

Location:

/sub-0007/ses-01/perf/sub-0007_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionPulseTime' for this file. It can be included one of the following locations: /asl.json, /sub-0007/sub-0007_asl.json, /sub-0007/ses-01/sub-0007_ses-01_asl.json, /sub-0007/ses-01/perf/sub-0007_ses-01_asl.json

and 693 more files

Warning: 3703 files

It is recommended to define 'BackgroundSuppressionNumberPulses' for this file, in case 'BackgroundSuppression' is set to true. 'BackgroundSuppressionNumberPulses' is the number of background suppression pulses used. Note that this excludes any effect of background suppression pulses applied before the labeling.

Location:

/sub-0001/ses-01/perf/sub-0001_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0001/sub-0001_asl.json, /sub-0001/ses-01/sub-0001_ses-01_asl.json, /sub-0001/ses-01/perf/sub-0001_ses-01_asl.json

Location:

/sub-0001/ses-02/perf/sub-0001_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0001/sub-0001_asl.json, /sub-0001/ses-02/sub-0001_ses-02_asl.json, /sub-0001/ses-02/perf/sub-0001_ses-02_asl.json

Location:

/sub-0002/ses-01/perf/sub-0002_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0002/sub-0002_asl.json, /sub-0002/ses-01/sub-0002_ses-01_asl.json, /sub-0002/ses-01/perf/sub-0002_ses-01_asl.json

Location:

/sub-0003/ses-01/perf/sub-0003_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0003/sub-0003_asl.json, /sub-0003/ses-01/sub-0003_ses-01_asl.json, /sub-0003/ses-01/perf/sub-0003_ses-01_asl.json

Location:

/sub-0003/ses-02/perf/sub-0003_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0003/sub-0003_asl.json, /sub-0003/ses-02/sub-0003_ses-02_asl.json, /sub-0003/ses-02/perf/sub-0003_ses-02_asl.json

Location:

/sub-0004/ses-02/perf/sub-0004_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0004/sub-0004_asl.json, /sub-0004/ses-02/sub-0004_ses-02_asl.json, /sub-0004/ses-02/perf/sub-0004_ses-02_asl.json

Location:

/sub-0005/ses-01/perf/sub-0005_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0005/sub-0005_asl.json, /sub-0005/ses-01/sub-0005_ses-01_asl.json, /sub-0005/ses-01/perf/sub-0005_ses-01_asl.json

Location:

/sub-0005/ses-02/perf/sub-0005_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0005/sub-0005_asl.json, /sub-0005/ses-02/sub-0005_ses-02_asl.json, /sub-0005/ses-02/perf/sub-0005_ses-02_asl.json

Location:

/sub-0006/ses-02/perf/sub-0006_ses-02_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0006/sub-0006_asl.json, /sub-0006/ses-02/sub-0006_ses-02_asl.json, /sub-0006/ses-02/perf/sub-0006_ses-02_asl.json

Location:

/sub-0007/ses-01/perf/sub-0007_ses-01_asl.nii.gz

Reason:

You should define 'BackgroundSuppressionNumberPulses' for this file. It can be included one of the following locations: /asl.json, /sub-0007/sub-0007_asl.json, /sub-0007/ses-01/sub-0007_ses-01_asl.json, /sub-0007/ses-01/perf/sub-0007_ses-01_asl.json

and 693 more files

FilesDownloadMetadata

Queensland Twin Adolescent Brain (QTAB)

Queensland Twin Adolescent Brain (QTAB)

README

The Queensland Twin Adolescent Brain (QTAB) Project

We describe the Queensland Twin Adolescent Brain (QTAB) dataset and provide a detailed methodology and technical validation to facilitate data usage. The QTAB dataset comprises multimodal neuroimaging, as well as cognitive and mental health data collected in adolescent twins over two sessions (session 1: N = 422, age 9-14 years; session 2: N = 304, 10-16 years). The MRI protocol consisted of T1-weighted (MP2RAGE), T2-weighted, FLAIR, high-resolution TSE, SWI, resting-state fMRI, DWI, and ASL scans. Two fMRI tasks were added in session 2 to probe emotion-relevant neural processes (emotional conflict task) and evoke activity in the Theory of Mind network (passive movie watching task). Outside of the scanner, we assessed cognitive function using standardised tests, obtained self-reports of symptoms for anxiety and depression, perceived stress, sleepiness, as well as measures of pubertal development, peer relationships, early life factors, and family sociodemographic factors. We additionally collected several biological samples for genomic and metagenomic analysis. The QTAB project was established with the purpose of promoting the conduct of health-related research in adolescence.

Note: Basic demographic data (age [rounded down], sex, handedness) is provided at the top-level of the dataset directory in participants.tsv. Restricted demographic data (i.e., age in months, zygosity, multiple birth status, birth order), as well as non-imaging phenotypic data is stored at The University of Queensland's institutional repository, UQ eSpace (https://doi.org/10.48610/e891597). Access to the dataset can be requested via the "Request access to the dataset link" in the UQ eSpace record.

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Authors

Strike, Lachlan T.
Hansell, Narelle K.
Miller, Jessica L.
Chuang, Kai-Hsiang
Thompson, Paul M.
de Zubicaray, Greig I.
McMahon, Katie L.
Wright, Margaret J.

Available Modalities

Versions

Draft

Updated: 2022-06-20

Tasks

rest, partlycloudy, emotionalconflict

Uploaded by

Lachlan Strike on 2022-05-31 - 26 days ago

Last Updated

2022-06-20 - 7 days ago

Sessions

2

Participants

417

Dataset DOI

doi:10.18112/openneuro.ds004146.v1.0.2

License

CC0

Acknowledgements

We are forever grateful to the twins and their families for their willingness to participate in our studies. We thank Liza van Eijk, Victoria O'Callaghan, Islay Davies, Ethan Campi, Kimberley Huang, Eleanor Roga, Michael Day, Aiman Al-Najjar, Zoie Nott, Tom Shaw, Nicole Atcheson, and Sarah Daniel for data acquisition. We thank Naomi Wray for funding the collection of metabolic samples, including detailed dietary data, Ian Hickie and Kathleen Merikangas for funding and support of actigraphy data, and Sarah Medland and ENIGMA GWAS for funding genotyping. Special thanks to Anjali Henders, Leanne Wallace, Lorelle Nunn and the many laboratory assistants at the Human Studies Unit (part of the Program in Complex Trait Genomics based at the Institute of Molecular Bioscience, University of Queensland) for the processing and storage of biological samples. Thanks also to Julie Henry for helpful discussion of social cognition measures. The QTAB project was funded by the National Health and Medical Research Council (NHMRC), Australia (Project Grant ID: 1078756 to MJW), the Queensland Brain Institute, University of Queensland, and with the assistance of resources from the Centre for Advanced Imaging and the Queensland Cyber Infrastructure Foundation, University of Queensland. We acknowledge the Queensland Twin Registry (QTwin) (https://www.qimrberghofer.edu.au/study/queensland-twin-registry-study) for generously sharing database information for recruitment. Recruitment was further facilitated through access to Twins Research Australia, a national resource supported by a Centre of Research Excellence Grant (ID: 1079102) from the NHMRC. Lastly, we thank the many researchers worldwide for providing access to their assessments.

How to Acknowledge

Please cite the following publication describing the dataset: Strike, L. T., Hansell, N. K., Miller, J. L., Chuang, K.-H., Thompson, P. M., de Zubicaray, G. I., McMahon, K. L., Wright, M. J. (2022). The Queensland Twin Adolescent Brain Project, a longitudinal study of adolescent brain development. Manuscript submitted for publication.

When acknowledging the QTAB project studies should consider including the following: The QTAB project resource was produced as a result of i) the goodwill and contribution of 422 twin/triplet participants and their parents, ii) funding from the National Health and Medical Research Council, Australia (APP1078756) and the Queensland Brain Institute, University of Queensland, iii) access to several key resources, including the Centre for Advanced Imaging, the Human Studies Unit, Institute of Molecular Bioscience, and the Queensland Cyber Infrastructure Foundation, at the University of Queensland, local and national twin registries at the QIMR Berghofer Medical Research Institute and Twin Research Australia, as well as the many assessments made available by researchers worldwide, and iv) was established with the purpose of promoting the conduct of health-related research in adolescence.

Funding

National Health and Medical Research Council Project Grant APP1078756
Queensland Brain Institute, University of Queensland

References and Links

N/A

Ethics Approvals

Children's Health Queensland Human Research Ethics Committee (HREC) (reference HREC/16/QRCH/270)
University of Queensland HREC (reference 2016001784)