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MRI
An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD)

OpenNeuro Accession Number: ds004097Files: 2278Size: 139.92GB

BIDS Validation

2 Warnings Valid
FilesDownloadMetadata
An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD)
An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD)
  •   CHANGES
  •   dataset_description.json
  •   README
  •   task-MID_bold.json
  •   task-nback_bold.json
  •   task-rest_bold.json
  •   task-SST_bold.json
  • derivatives
  • sub-NDARDD890AYU
  • sub-NDARFT076LW8
  • sub-NDARJZ387ZJA
  • sub-NDARMC914MYN
  • sub-NDARNC943BP8
  • sub-NDARTR918TJX
  • sub-NDARTW625MMA
  • sub-NDARUD216XXV

README

This data collection from Yale University's Fundamentals of the Adolescent Brain (FAB) Lab contains an accelerated adult equivalent of the ABCD Study(R) neuroimaging dataset. The Brain Imaging Data Structure (BIDS) directory includes 5 sessions for each of 8 participants, spaced 1 week apart. Task-based data is excluded for one participant (sub-NDARUD216XXV) due to technical issues during scanning as well as scheduling issues (sessions >1 week apart). Event timing files unavailable for 1 subject/session/run due to E-prime error (sub-NDARJZ387ZJA, ses-02, MID, run 2).

BIDS input data were converted from DICOMs using Dcm2Bids (https://github.com/cbedetti/Dcm2Bids). BIDS derivatives data were derived from the OHSU DCAN Labs ABCD-BIDS MRI processing pipeline which outputs Human Connectome Project (HCP) Minimal Preprocessing Pipelines-style data in both volume and surface spaces (https://doi.org/10.5281/zenodo.2587210, https://doi.org/10.1016/j.neuroimage.2013.04.127). This collection is independent from ABCD Data Collection 2573. In addition to preprocessed data, derivatives include outputs from FSL's film_gls. See reference below for further details on derivatives generation.

Publication describing the dataset: Rapuano, K.M., Conley, M.I., Juliano, A.C., Conan, G.M., Maza, M.T., Woodman, K., Martinez, S.A., Earl, E., Perrone, A., Feczko, E. Fair, D.A., Watts, R., Casey, B.J. & Rosenberg, M.D. (2022). An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD). NeuroImage, 119215.

Please contact Kristina Rapuano with questions or issues: kristinarapuano@gmail.com

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Authors

  • Kristina M. Rapuano
  • May I. Conley
  • Anthony C. Juliano
  • Gregory M. Conan
  • Maria T. Maza
  • Kylie Woodman
  • Steven A. Martinez
  • Eric Earl
  • Anders Perrone
  • Eric Feczko
  • Damien A. Fair
  • Richard Watts
  • BJ Casey
  • Monica D. Rosenberg

Available Modalities

MRI

Versions

Draft
Updated: 2022-05-21
Versions

Tasks

Monetary Incentive Delay, n-back, Resting State (eyes open), Stop-Signal Task

Uploaded by

Kristina Rapuano on 2022-04-13 - about 1 month ago

Last Updated

2022-05-21 - 2 days ago

Sessions

5

Participants

8

Dataset DOI

doi:10.18112/openneuro.ds004097.v1.1.0

License

CC0

Acknowledgements

The Developmental Cognition and Neuroimaging (DCAN) Labs who developed the ABCD-BIDS MRI processing pipeline (DOI: 10.5281/zenodo.2587210; https://github.com/DCAN-Labs; Damien A. Fair, Ph.D., Eric Earl, Anders Perrone, Darrick Sturgeon, Kathy Snider, Anthony Galassi). ABCD Acknowledgement: Behavioral data used in the preparation of the associated manuscript were obtained from the Adolescent Brain Cognitive Development (ABCD) Study (abcdstudy.org), held in the NIMH Data Archive (NDA). This is a multisite, longitudinal study designed to recruit more than 10,000 children ages 9-10 and follow them over 10 years into early adulthood. The ABCD Study is supported by the National Institutes of Health and additional federal partners under award numbers U01DA041022, U01DA041028, U01DA041048, U01DA041089, U01DA041106, U01DA041117, U01DA041120, U01DA041134, U01DA041148, U01DA041156, U01DA041174, U24DA041123, and U24DA041147. A full list of supporters is available at abcdstudy.org/nih-collaborators. A listing of participating sites and a complete listing of the study investigators can be found at abcdstudy.org/principal-investigators.html. ABCD consortium investigators designed and implemented the study and/or provided data but did not necessarily participate in analysis or writing of this report. This manuscript reflects the views of the authors and may not reflect the opinions or views of the NIH or ABCD consortium investigators.

How to Acknowledge

Please cite this dataset as: Rapuano, K.M., Conley, M.I., Juliano, A.C., Conan, G.M., Maza, M.T., Woodman, K., Martinez, S.A., Earl, E., Perrone, A., Feczko, E. Fair, D.A., Watts, R., Casey, B.J. & Rosenberg, M.D. (2022). An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD). OpenNeuro, ds004097.

Funding

  • Yale BIC Discovery funding
  • NIH U01 DA041174

References and Links

  • Rapuano, K.M., Conley, M.I., Juliano, A.C., Conan, G.M., Maza, M.T., Woodman, K., Martinez, S.A., Earl, E., Perrone, A., Feczko, E. Fair, D.A., Watts, R., Casey, B.J. & Rosenberg, M.D. (2022). An open-access accelerated adult equivalent of the ABCD Study neuroimaging dataset (a-ABCD). NeuroImage, 119215.
  • The Adolescent Brain Cognitive Development (ABCD) study: Imaging acquisition across 21 sites. Casey B.J., Cannonier T., Conley M.I., Cohen A.O., Barch D.M., Heitzeg M.M., Soules M.E., Teslovich T., Dellarco D.V., Garavan H., Orr C.A., Wager T.D., Banich M.T., Speer N.K., Sutherland M.T., Riedel M.C., Dick A.S., Bjork J.M., Thomas K.M., Chaarani B., Mejia M.H., Hagler D.J. Jr, Daniela Cornejo M., Sicat C.S., Harms M.P., Dosenbach N.U.F., Rosenberg M., Earl E., Bartsch H., Watts R., Polimeni J.R., Kuperman J.M., Fair D.A., Dale A.M. ABCD Imaging Acquisition Workgroup. Dev Cogn Neurosci. 2018 Aug. doi: 10.1016/j.dcn.2018.03.001. Epub 2018 Mar 14. Review. PMID: 29567376.
  • D. Sturgeon, Eric Earl, Anders Perrone, & Kathy. (2021). DCAN-Labs/abcd-hcp-pipeline: Minor update to DCAN BOLD Processing and MRE version (v0.0.4). Zenodo. https://doi.org/10.5281/zenodo.4571051

Ethics Approvals

  • N/A
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