Face processing MEEG dataset with HED annotation

uploaded by Dung Truong on 2021-05-04 - about 2 months ago
last modified on 2021-05-11 - about 1 month ago
authored by Daniel G. Wakeman, Richard N Henson
21557239
We found 3 Warnings in your dataset. You are not required to fix warnings, but doing so will make your dataset more BIDS compliant.

/sub-002/eeg/sub-002_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-004/eeg/sub-004_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-004/eeg/sub-004_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-004/eeg/sub-004_task-FacePerception_run-3_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-005/eeg/sub-005_task-FacePerception_run-5_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-007/eeg/sub-007_task-FacePerception_run-2_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-009/eeg/sub-009_task-FacePerception_run-3_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-014/eeg/sub-014_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-014/eeg/sub-014_task-FacePerception_run-6_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-014/eeg/sub-014_task-FacePerception_run-6_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

and 4 more files

/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv

A HED tag extension was found.

WARNING: Tag extension found - "Attribute/Sensory/Visual/Color/Achromatic"

/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv

A HED warning was found in the JSON sidecar.

/task-FacePerception_events.json


OpenNeuro Accession Number: ds003645
Files: 1016, Size: 19.59GB, Subjects: 18, Session: 1
Available Tasks: FacePerception
Available Modalities: defacemask, channels, eeg, events

README

This dataset consists of the MEEG (sMRI+MEG+EEG) portion of the multisubject, multimodal face processing dataset facing processing dataset (ds000117). This dataset was originally acquired and shared by Daniel Wakeman and Richard Hensen (https://pubmed.ncbi.nlm.nih.gov/25977808/). The data has been repackaged in EEGLAB format and has undergone minimal preprocessing as well as reorganization and annotation of the dataset events. The MEG and EEG were simultaneously recorded, and sMRI was preserved for EEG source localization.

The preprocessing, which was performed using the whextracteegBIDS.m located in the code directory, includes the following steps: - Ignore MRI data except for sMRI. - Extract EEG channels out of the MEG/EEG fif data - Add fiducials - Rename EOG and EKG channels - Extract events from event channel - Remove spurious events 5, 6, 7, 13, 14, 15, 17, 18 and 19 - Remove spurious event 24 for subject 3 run 4 - Rename events taking into account button assigned to each subject - Correct event latencies (events have a shift of 34 ms) - Resample data to 250 Hz (this step is performed because this dataset is used in a tutorial for EEGLAB and needs to be lightweight) - Remove event fields urevent and duration - Fill empty fields for events boundary and stim_file. - Save as EEGLAB .set format

Ramon Martinez, Dung Truong, Kay Robbins, Scott Makeig, Arnaud Delorme (UCSD, La Jolla, CA, USA)

Authors

  • Daniel G. Wakeman
  • Richard N Henson

Dataset DOI

10.18112/openneuro.ds003645.v1.0.0

License

CC0

Acknowledgements

How to Acknowledge

Funding

  • This work was supported by the UK Medical Research Council (MCA0605PR10) and Elekta Ltd.

References and Links

Ethics Approvals

How To Cite

Copy
Daniel G. Wakeman and Richard N Henson (2021). Face processing MEEG dataset with HED annotation. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003645.v1.0.0
More citation info

Face processing MEEG dataset with HED annotation

uploaded by Dung Truong on 2021-05-04 - about 2 months ago
last modified on 2021-05-11 - about 1 month ago
authored by Daniel G. Wakeman, Richard N Henson
21557239

OpenNeuro Accession Number: ds003645
Files: 1016, Size: 19.59GB, Subjects: 18, Session: 1
Available Tasks: FacePerception
Available Modalities: defacemask, channels, eeg, events

README

This dataset consists of the MEEG (sMRI+MEG+EEG) portion of the multisubject, multimodal face processing dataset facing processing dataset (ds000117). This dataset was originally acquired and shared by Daniel Wakeman and Richard Hensen (https://pubmed.ncbi.nlm.nih.gov/25977808/). The data has been repackaged in EEGLAB format and has undergone minimal preprocessing as well as reorganization and annotation of the dataset events. The MEG and EEG were simultaneously recorded, and sMRI was preserved for EEG source localization.

The preprocessing, which was performed using the whextracteegBIDS.m located in the code directory, includes the following steps: - Ignore MRI data except for sMRI. - Extract EEG channels out of the MEG/EEG fif data - Add fiducials - Rename EOG and EKG channels - Extract events from event channel - Remove spurious events 5, 6, 7, 13, 14, 15, 17, 18 and 19 - Remove spurious event 24 for subject 3 run 4 - Rename events taking into account button assigned to each subject - Correct event latencies (events have a shift of 34 ms) - Resample data to 250 Hz (this step is performed because this dataset is used in a tutorial for EEGLAB and needs to be lightweight) - Remove event fields urevent and duration - Fill empty fields for events boundary and stim_file. - Save as EEGLAB .set format

Ramon Martinez, Dung Truong, Kay Robbins, Scott Makeig, Arnaud Delorme (UCSD, La Jolla, CA, USA)

Authors

  • Daniel G. Wakeman
  • Richard N Henson

Dataset DOI

10.18112/openneuro.ds003645.v1.0.0

License

CC0

Acknowledgements

How to Acknowledge

Funding

  • This work was supported by the UK Medical Research Council (MCA0605PR10) and Elekta Ltd.

References and Links

Ethics Approvals

How To Cite

Copy
Daniel G. Wakeman and Richard N Henson (2021). Face processing MEEG dataset with HED annotation. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003645.v1.0.0
More citation info

Dataset File Tree

Git Hash: e77afecĀ 

BIDS Validation

We found 3 Warnings in your dataset. You are not required to fix warnings, but doing so will make your dataset more BIDS compliant.

/sub-002/eeg/sub-002_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-004/eeg/sub-004_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-004/eeg/sub-004_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-004/eeg/sub-004_task-FacePerception_run-3_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-005/eeg/sub-005_task-FacePerception_run-5_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-007/eeg/sub-007_task-FacePerception_run-2_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-009/eeg/sub-009_task-FacePerception_run-3_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-014/eeg/sub-014_task-FacePerception_run-1_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-014/eeg/sub-014_task-FacePerception_run-6_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

/sub-014/eeg/sub-014_task-FacePerception_run-6_events.tsv

The json sidecar does not contain this column value as a possible key to a HED string.

4352

and 4 more files

/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv

A HED tag extension was found.

WARNING: Tag extension found - "Attribute/Sensory/Visual/Color/Achromatic"

/sub-002/eeg/sub-002_task-FacePerception_run-2_events.tsv

A HED warning was found in the JSON sidecar.

/task-FacePerception_events.json

Dataset File Tree

Git Hash: e77afecĀ 

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