Mood induction in MDD and healthy adolescents

uploaded by Lucrezia Liuzzi on 2021-03-16 - about 2 months ago
last modified on 2021-03-18 - about 2 months ago
authored by Lucrezia Liuzzi, Katharine Chang, Hanna Keren, Charles Zheng, Dipta Saha, Dylan Nielson, Argyris Stringaris
155489
We found 2 Warnings in your dataset. You are not required to fix warnings, but doing so will make your dataset more BIDS compliant.

/sub-23520/anat/sub-23520_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23540/anat/sub-23540_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23593/anat/sub-23593_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23607/anat/sub-23607_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23656/anat/sub-23656_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 208,256,256 (voxels).

/sub-23693/anat/sub-23693_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 208,256,256 (voxels).

/sub-23777/anat/sub-23777_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23927/anat/sub-23927_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23951/anat/sub-23951_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-24071/anat/sub-24071_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

and 14 more files

/participants.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: participant_age, sex, group not defined, please define in: /participants.json

/sub-21111/meg/sub-21111_task-mmi3_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-1_events.json,/task-mmi3_run-1_events.json,/sub-21111/sub-21111_events.json,/sub-21111/sub-21111_task-mmi3_events.json,/sub-21111/sub-21111_run-1_events.json,/sub-21111/sub-21111_task-mmi3_run-1_events.json,/sub-21111/meg/sub-21111_events.json,/sub-21111/meg/sub-21111_task-mmi3_events.json,/sub-21111/meg/sub-21111_run-1_events.json,/sub-21111/meg/sub-21111_task-mmi3_run-1_events.json

/sub-21111/meg/sub-21111_task-mmi3_run-2_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-2_events.json,/task-mmi3_run-2_events.json,/sub-21111/sub-21111_events.json,/sub-21111/sub-21111_task-mmi3_events.json,/sub-21111/sub-21111_run-2_events.json,/sub-21111/sub-21111_task-mmi3_run-2_events.json,/sub-21111/meg/sub-21111_events.json,/sub-21111/meg/sub-21111_task-mmi3_events.json,/sub-21111/meg/sub-21111_run-2_events.json,/sub-21111/meg/sub-21111_task-mmi3_run-2_events.json

/sub-21111/meg/sub-21111_task-rest_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-rest_events.json,/run-1_events.json,/task-rest_run-1_events.json,/sub-21111/sub-21111_events.json,/sub-21111/sub-21111_task-rest_events.json,/sub-21111/sub-21111_run-1_events.json,/sub-21111/sub-21111_task-rest_run-1_events.json,/sub-21111/meg/sub-21111_events.json,/sub-21111/meg/sub-21111_task-rest_events.json,/sub-21111/meg/sub-21111_run-1_events.json,/sub-21111/meg/sub-21111_task-rest_run-1_events.json

/sub-22658/meg/sub-22658_task-mmi3_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-1_events.json,/task-mmi3_run-1_events.json,/sub-22658/sub-22658_events.json,/sub-22658/sub-22658_task-mmi3_events.json,/sub-22658/sub-22658_run-1_events.json,/sub-22658/sub-22658_task-mmi3_run-1_events.json,/sub-22658/meg/sub-22658_events.json,/sub-22658/meg/sub-22658_task-mmi3_events.json,/sub-22658/meg/sub-22658_run-1_events.json,/sub-22658/meg/sub-22658_task-mmi3_run-1_events.json

/sub-22658/meg/sub-22658_task-mmi3_run-2_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-2_events.json,/task-mmi3_run-2_events.json,/sub-22658/sub-22658_events.json,/sub-22658/sub-22658_task-mmi3_events.json,/sub-22658/sub-22658_run-2_events.json,/sub-22658/sub-22658_task-mmi3_run-2_events.json,/sub-22658/meg/sub-22658_events.json,/sub-22658/meg/sub-22658_task-mmi3_events.json,/sub-22658/meg/sub-22658_run-2_events.json,/sub-22658/meg/sub-22658_task-mmi3_run-2_events.json

/sub-22658/meg/sub-22658_task-rest_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-rest_events.json,/run-1_events.json,/task-rest_run-1_events.json,/sub-22658/sub-22658_events.json,/sub-22658/sub-22658_task-rest_events.json,/sub-22658/sub-22658_run-1_events.json,/sub-22658/sub-22658_task-rest_run-1_events.json,/sub-22658/meg/sub-22658_events.json,/sub-22658/meg/sub-22658_task-rest_events.json,/sub-22658/meg/sub-22658_run-1_events.json,/sub-22658/meg/sub-22658_task-rest_run-1_events.json

/sub-22694/meg/sub-22694_task-mmi3_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-1_events.json,/task-mmi3_run-1_events.json,/sub-22694/sub-22694_events.json,/sub-22694/sub-22694_task-mmi3_events.json,/sub-22694/sub-22694_run-1_events.json,/sub-22694/sub-22694_task-mmi3_run-1_events.json,/sub-22694/meg/sub-22694_events.json,/sub-22694/meg/sub-22694_task-mmi3_events.json,/sub-22694/meg/sub-22694_run-1_events.json,/sub-22694/meg/sub-22694_task-mmi3_run-1_events.json

/sub-22694/meg/sub-22694_task-mmi3_run-2_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-2_events.json,/task-mmi3_run-2_events.json,/sub-22694/sub-22694_events.json,/sub-22694/sub-22694_task-mmi3_events.json,/sub-22694/sub-22694_run-2_events.json,/sub-22694/sub-22694_task-mmi3_run-2_events.json,/sub-22694/meg/sub-22694_events.json,/sub-22694/meg/sub-22694_task-mmi3_events.json,/sub-22694/meg/sub-22694_run-2_events.json,/sub-22694/meg/sub-22694_task-mmi3_run-2_events.json

/sub-22694/meg/sub-22694_task-mmi3_run-3_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-3_events.json,/task-mmi3_run-3_events.json,/sub-22694/sub-22694_events.json,/sub-22694/sub-22694_task-mmi3_events.json,/sub-22694/sub-22694_run-3_events.json,/sub-22694/sub-22694_task-mmi3_run-3_events.json,/sub-22694/meg/sub-22694_events.json,/sub-22694/meg/sub-22694_task-mmi3_events.json,/sub-22694/meg/sub-22694_run-3_events.json,/sub-22694/meg/sub-22694_task-mmi3_run-3_events.json

and 109 more files

OpenNeuro Accession Number: ds003568
Files: 3707, Size: 123.42GB, Subjects: 51, Session: 1
Available Tasks: mmi3, rest
Available Modalities: T1w, coordsystem, channels, events, 02, meg, 03, 04, 05, 06, 01, t101, t105, t39, rest, t109

README

This dataset contains the MEG and structural MRI data from the "Electrophysiological correlates of mood and reward dynamics in human adolescents" pre-registered analysis (https://www.biorxiv.org/content/10.1101/2021.03.04.433969v1).

The task-mmi3 data corresponds to the monetary gambling mood induction task described in the paper. Task-mmi3 data has been pre-processed marking bad channels and bad segments (motion > 5mm or/and noise artifacts). Task-rest data is unprocessed 10 minutes resting state scan acquired during the same scanning session.

Anatomical MRIs have been defaced and co-registered fiducial coordinates are available in the anatomical json files.

Data from four confirmatory subjects are not made available because of missing data sharing consent. sub-22658 and sub-24247 do not have an available structural scan.

Authors

  • Lucrezia Liuzzi
  • Katharine Chang
  • Hanna Keren
  • Charles Zheng
  • Dipta Saha
  • Dylan Nielson
  • Argyris Stringaris

Dataset DOI

10.18112/openneuro.ds003568.v1.0.2

License

CC0

Acknowledgements

This research was supported by the Intramural Research Program of the National Institute of Mental Health National Institutes of Health (NIH). This work used the computational resources of the NIH HPC (high-performance computing) Biowulf cluster (http://hpc.nih.gov).

How to Acknowledge

Please cite: Lucrezia Liuzzi, Katharine Chang, Hanna Keren, Charles Zheng, Dipta Saha,Dylan Nielson and Argyris Stringaris, Electrophysiological correlates of mood and reward dynamics in human adolescents, BioRxiv 2021

Funding

  • Intramural Research Program of the National Institute of Mental Health National Institutes of Health (NIH) (Grant No. ZIA-MH002957-01 [to AS])

Ethics Approvals

  • NIH Institutional Review Board

How To Cite

Copy
Lucrezia Liuzzi and Katharine Chang and Hanna Keren and Charles Zheng and Dipta Saha and Dylan Nielson and Argyris Stringaris (2021). Mood induction in MDD and healthy adolescents. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003568.v1.0.2
More citation info

Mood induction in MDD and healthy adolescents

uploaded by Lucrezia Liuzzi on 2021-03-16 - about 2 months ago
last modified on 2021-03-18 - about 2 months ago
authored by Lucrezia Liuzzi, Katharine Chang, Hanna Keren, Charles Zheng, Dipta Saha, Dylan Nielson, Argyris Stringaris
155489

OpenNeuro Accession Number: ds003568
Files: 3707, Size: 123.42GB, Subjects: 51, Session: 1
Available Tasks: mmi3, rest
Available Modalities: T1w, coordsystem, channels, events, 02, meg, 03, 04, 05, 06, 01, t101, t105, t39, rest, t109

README

This dataset contains the MEG and structural MRI data from the "Electrophysiological correlates of mood and reward dynamics in human adolescents" pre-registered analysis (https://www.biorxiv.org/content/10.1101/2021.03.04.433969v1).

The task-mmi3 data corresponds to the monetary gambling mood induction task described in the paper. Task-mmi3 data has been pre-processed marking bad channels and bad segments (motion > 5mm or/and noise artifacts). Task-rest data is unprocessed 10 minutes resting state scan acquired during the same scanning session.

Anatomical MRIs have been defaced and co-registered fiducial coordinates are available in the anatomical json files.

Data from four confirmatory subjects are not made available because of missing data sharing consent. sub-22658 and sub-24247 do not have an available structural scan.

Authors

  • Lucrezia Liuzzi
  • Katharine Chang
  • Hanna Keren
  • Charles Zheng
  • Dipta Saha
  • Dylan Nielson
  • Argyris Stringaris

Dataset DOI

10.18112/openneuro.ds003568.v1.0.2

License

CC0

Acknowledgements

This research was supported by the Intramural Research Program of the National Institute of Mental Health National Institutes of Health (NIH). This work used the computational resources of the NIH HPC (high-performance computing) Biowulf cluster (http://hpc.nih.gov).

How to Acknowledge

Please cite: Lucrezia Liuzzi, Katharine Chang, Hanna Keren, Charles Zheng, Dipta Saha,Dylan Nielson and Argyris Stringaris, Electrophysiological correlates of mood and reward dynamics in human adolescents, BioRxiv 2021

Funding

  • Intramural Research Program of the National Institute of Mental Health National Institutes of Health (NIH) (Grant No. ZIA-MH002957-01 [to AS])

Ethics Approvals

  • NIH Institutional Review Board

How To Cite

Copy
Lucrezia Liuzzi and Katharine Chang and Hanna Keren and Charles Zheng and Dipta Saha and Dylan Nielson and Argyris Stringaris (2021). Mood induction in MDD and healthy adolescents. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003568.v1.0.2
More citation info

Dataset File Tree

Git Hash: 6beab7b 

BIDS Validation

We found 2 Warnings in your dataset. You are not required to fix warnings, but doing so will make your dataset more BIDS compliant.

/sub-23520/anat/sub-23520_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23540/anat/sub-23540_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23593/anat/sub-23593_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23607/anat/sub-23607_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23656/anat/sub-23656_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 208,256,256 (voxels).

/sub-23693/anat/sub-23693_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 208,256,256 (voxels).

/sub-23777/anat/sub-23777_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23927/anat/sub-23927_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-23951/anat/sub-23951_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

/sub-24071/anat/sub-24071_acq-mprage_T1w.nii.gz

The most common set of dimensions is: 172,256,256 (voxels), This file has the dimensions: 176,256,256 (voxels).

and 14 more files

/participants.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: participant_age, sex, group not defined, please define in: /participants.json

/sub-21111/meg/sub-21111_task-mmi3_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-1_events.json,/task-mmi3_run-1_events.json,/sub-21111/sub-21111_events.json,/sub-21111/sub-21111_task-mmi3_events.json,/sub-21111/sub-21111_run-1_events.json,/sub-21111/sub-21111_task-mmi3_run-1_events.json,/sub-21111/meg/sub-21111_events.json,/sub-21111/meg/sub-21111_task-mmi3_events.json,/sub-21111/meg/sub-21111_run-1_events.json,/sub-21111/meg/sub-21111_task-mmi3_run-1_events.json

/sub-21111/meg/sub-21111_task-mmi3_run-2_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-2_events.json,/task-mmi3_run-2_events.json,/sub-21111/sub-21111_events.json,/sub-21111/sub-21111_task-mmi3_events.json,/sub-21111/sub-21111_run-2_events.json,/sub-21111/sub-21111_task-mmi3_run-2_events.json,/sub-21111/meg/sub-21111_events.json,/sub-21111/meg/sub-21111_task-mmi3_events.json,/sub-21111/meg/sub-21111_run-2_events.json,/sub-21111/meg/sub-21111_task-mmi3_run-2_events.json

/sub-21111/meg/sub-21111_task-rest_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-rest_events.json,/run-1_events.json,/task-rest_run-1_events.json,/sub-21111/sub-21111_events.json,/sub-21111/sub-21111_task-rest_events.json,/sub-21111/sub-21111_run-1_events.json,/sub-21111/sub-21111_task-rest_run-1_events.json,/sub-21111/meg/sub-21111_events.json,/sub-21111/meg/sub-21111_task-rest_events.json,/sub-21111/meg/sub-21111_run-1_events.json,/sub-21111/meg/sub-21111_task-rest_run-1_events.json

/sub-22658/meg/sub-22658_task-mmi3_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-1_events.json,/task-mmi3_run-1_events.json,/sub-22658/sub-22658_events.json,/sub-22658/sub-22658_task-mmi3_events.json,/sub-22658/sub-22658_run-1_events.json,/sub-22658/sub-22658_task-mmi3_run-1_events.json,/sub-22658/meg/sub-22658_events.json,/sub-22658/meg/sub-22658_task-mmi3_events.json,/sub-22658/meg/sub-22658_run-1_events.json,/sub-22658/meg/sub-22658_task-mmi3_run-1_events.json

/sub-22658/meg/sub-22658_task-mmi3_run-2_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-2_events.json,/task-mmi3_run-2_events.json,/sub-22658/sub-22658_events.json,/sub-22658/sub-22658_task-mmi3_events.json,/sub-22658/sub-22658_run-2_events.json,/sub-22658/sub-22658_task-mmi3_run-2_events.json,/sub-22658/meg/sub-22658_events.json,/sub-22658/meg/sub-22658_task-mmi3_events.json,/sub-22658/meg/sub-22658_run-2_events.json,/sub-22658/meg/sub-22658_task-mmi3_run-2_events.json

/sub-22658/meg/sub-22658_task-rest_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-rest_events.json,/run-1_events.json,/task-rest_run-1_events.json,/sub-22658/sub-22658_events.json,/sub-22658/sub-22658_task-rest_events.json,/sub-22658/sub-22658_run-1_events.json,/sub-22658/sub-22658_task-rest_run-1_events.json,/sub-22658/meg/sub-22658_events.json,/sub-22658/meg/sub-22658_task-rest_events.json,/sub-22658/meg/sub-22658_run-1_events.json,/sub-22658/meg/sub-22658_task-rest_run-1_events.json

/sub-22694/meg/sub-22694_task-mmi3_run-1_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-1_events.json,/task-mmi3_run-1_events.json,/sub-22694/sub-22694_events.json,/sub-22694/sub-22694_task-mmi3_events.json,/sub-22694/sub-22694_run-1_events.json,/sub-22694/sub-22694_task-mmi3_run-1_events.json,/sub-22694/meg/sub-22694_events.json,/sub-22694/meg/sub-22694_task-mmi3_events.json,/sub-22694/meg/sub-22694_run-1_events.json,/sub-22694/meg/sub-22694_task-mmi3_run-1_events.json

/sub-22694/meg/sub-22694_task-mmi3_run-2_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-2_events.json,/task-mmi3_run-2_events.json,/sub-22694/sub-22694_events.json,/sub-22694/sub-22694_task-mmi3_events.json,/sub-22694/sub-22694_run-2_events.json,/sub-22694/sub-22694_task-mmi3_run-2_events.json,/sub-22694/meg/sub-22694_events.json,/sub-22694/meg/sub-22694_task-mmi3_events.json,/sub-22694/meg/sub-22694_run-2_events.json,/sub-22694/meg/sub-22694_task-mmi3_run-2_events.json

/sub-22694/meg/sub-22694_task-mmi3_run-3_events.tsv

Tabular file contains custom columns not described in a data dictionary

Columns: type not defined, please define in: /events.json, /task-mmi3_events.json,/run-3_events.json,/task-mmi3_run-3_events.json,/sub-22694/sub-22694_events.json,/sub-22694/sub-22694_task-mmi3_events.json,/sub-22694/sub-22694_run-3_events.json,/sub-22694/sub-22694_task-mmi3_run-3_events.json,/sub-22694/meg/sub-22694_events.json,/sub-22694/meg/sub-22694_task-mmi3_events.json,/sub-22694/meg/sub-22694_run-3_events.json,/sub-22694/meg/sub-22694_task-mmi3_run-3_events.json

and 109 more files

Dataset File Tree

Git Hash: 6beab7b 

Comments

Please sign in to contribute to the discussion.
By liuzzi.lucrezia.1011@gmail.com - about 2 months ago
Added two subjects missing from previous version with no available anatomical information