MRI
SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.

OpenNeuro Accession Number: ds003346Files: 1695Size: 13.26GB

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SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.

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SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.

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README

The SUDMEX_CONN dataset is the result of a case-control study of cocaine use disorder patients. The study was done at the National Institute of Psychiatry in Mexico City by PIs Dr. Eduardo A. Garza-Villarreal and Jorge J. Gonzalez Olvera.

The MRI sequences were: 1) T1-weighted, 2) rsfMRI 10 min, 3) HARDI-DWI multishell.

Full clinical data will be uploaded to Zenodo soon. This is the first official release.

Comments

Please sign in to contribute to the discussion.

By pabloreinhardt1@gmail.com - over 1 year ago

Hi, 
I couldn't find any information on the resting-state fMRI unfortunately... no scanning protocol. Is it possible to reach out to the researchers to get the information?

By egarza@gmail.com - over 1 year ago

Hi, sorry I don't get the messages. You can get everything from the JSONs, but if there is something specific I can help. email me at egarza@gmail.com

By danielbarbosa9@hotmail.com - over 1 year ago

Hi, 
Thanks for making this amazing dataset available. Could you tell me where I can find information regarding body mass index (BMI) or body weight and height? Are they available?
Thank you!

By egarza@gmail.com - over 1 year ago

Hi, thanks for your interest. Unfortunately we don't have that information.

By amithvasantha0114@gmail.com - 8 days ago

Hi, may I ask how the fMRI data was scanned? (ascending, descending, interleaved Siemens, etc) Thank you!

By egarza@gmail.com - 8 days ago

Hi. That info should be in the jsons, but it was ascending interleaved from Philips. Hope it 

Authors

Eduardo A. Garza-Villarreal, Jorge Julio Gonzalez Olvera, Thania Balducci, Diego Angeles Valdez, Alely Valencia, Jalil Rasgado

Available Modalities

MRI

Versions

1.1.1

Created: 2021-02-24

Tasks

rest

Uploaded by

Eduardo A. Garza-Villarreal on 2020-10-29 - over 1 year ago

Last Updated

2021-02-24 - over 1 year ago

Sessions

Participants

145

Dataset DOI

doi:10.18112/openneuro.ds003346.v1.1.1

License

CC0

How To Cite

Eduardo A. Garza-Villarreal and Jorge Julio Gonzalez Olvera and Thania Balducci and Diego Angeles Valdez and Alely Valencia and Jalil Rasgado (2021). SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003346.v1.1.1

More citation info

Acknowledgements

We would like to thank Ernesto Reyes Zamorano and Isabel Espinoza Luna for their assistance. We also thank the Laboratorio Nacional deVisualización Científica Avanzada (LAVIS) for the use of their computer cluster and the Laboratorio Nacional de Imagenología por Resonancia Magnética (LANIREM). Thanks also to Francisco J.Pellicer Graham, Margarita López-Titla, Aline Leduc, Erik Morelos-Santana, Lya Paas, Daniela Casillas, Sarael Alcauter, Luis Concha and Bernd Foerster. We also thank Rocio Estrada Ordoñez and Isabel Lizarindari Espinosa Luna at the Unidad de Atención Toxicologica Xochimilco for alltheir help and effort. Finally, we thank the study participants for their cooperationand patience. This project was funded by CONACYT-FOSISS project No. 0201493 and CONACYT-Cátedras project No. 2358948.

How to Acknowledge

1. Garza-Villarreal, E. A., M. M. Chakravarty, B. Hansen, S. F. Eskildsen, G. A. Devenyi, D. Castillo-Padilla, T. Balducci, et al. 2017. “The Effect of Crack Cocaine Addiction and Age on the Microstructure and Morphology of the Human Striatum and Thalamus Using Shape Analysis and Fast Diffusion Kurtosis Imaging.” Translational Psychiatry 7 (5): e1122–e1122. 2. Rasgado-Toledo, Jalil, Apurva Shah, Madhura Ingalhalikar, and Eduardo A. Garza-Villarreal. 2020. “Neurite Orientation Dispersion and Density Imaging in Cocaine Use Disorder.” Addiction Medicine. medRxiv. https://doi.org/10.1101/2020.10.28.20221911.

MRI
SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.

BIDS Validation

Warning: 1223 files

README

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Eduardo A. Garza-Villarreal and Jorge Julio Gonzalez Olvera and Thania Balducci and Diego Angeles Valdez and Alely Valencia and Jalil Rasgado (2021). SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003346.v1.1.1

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Eduardo A. Garza-Villarreal and Jorge Julio Gonzalez Olvera and Thania Balducci and Diego Angeles Valdez and Alely Valencia and Jalil Rasgado (2021). SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.. OpenNeuro. [Dataset] doi: 10.18112/openneuro.ds003346.v1.1.1

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SUDMEX_CONN: The Mexican dataset of cocaine use disorder patients.