MRI
TheVirtualBrain Macaque MRI

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TheVirtualBrain Macaque MRI
TheVirtualBrain Macaque MRI
  •   CHANGES
  •   dataset_description.json
  •   README
  •   task-rest_bold.json
  • derivatives
  • sub-01
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README

This dataset contains the raw MRI data used to build and validate the macaque connectome in TheVirtualBrain (thevirtualbrain.org), a software platform for large-scale network modelling. It includes T1, DWI and resting-state fMRI scans from 9 macaques. In addition to the raw data, we also provide preprocessed derivatives.

Other derivatives such as the macaque connectome, associated ROI parcellation and other data useful for large-scale modelling in TheVirtualBrain can be found at Zenodo.org (https://doi.org/10.5281/zenodo.1471588).

Details of this dataset can be found in Shen K, Bezgin G, Schirner M, Ritter P, Everling S, McIntosh AR (2018) A macaque connectome for large-scale network simulations in TheVirtualBrain. bioRxiv 480905, doi: https://doi.org/10.1101/480905, which should be cited when publishing work using this dataset. Additional details on fMRI acquisition and preprocessing can be found in Ghahremani M, Hutchison RM, Menon RS, Everling S (2017) Frontoparietal functional connectivity in the common marmoset. Cerebral Cortex 27 (8): 3890-3905. Additional details on DWI acquisition, preprocessing and tractography can be found in Shen K, Goulas A, Grayson DS, Eusebio J, Gati JS, Menon RS, McIntosh AR, Everling S (2019) Exploring the limits of network topology estimation using diffusion-based tractography and tracer studies in the macaque cortex. Neuroimage 191: 81-92.

Comments

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By ben.fulcher@sydney.edu.au - about 3 years ago
Typo in DOI to bioRxiv paper, should be: https://doi.org/10.1101/480905
By kshen@research.baycrest.org - about 3 years ago
Thanks Ben -- this has been corrected now.